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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115666605_115666893_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
115666605 - 115666893

Intron Length:
289

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTC|GTAAGGGTT

5'SS Class:
major

3'SS Sequence:
TCTGCCCCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATCAC

U12 Branch Point Sequence:
GTTTGGCTAACT

Flanking Amino Acid:
MMGLAMVEAISYVREKTKTA

Intron Amino Acid Position:
404

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.3
69.6
41.1

Major BPS
60.6
0.26
1.3
65.7
41

Major PPT
71.7
0.49
0.8
62.2
34.7

Minor 5ss
36.7
-1.5
3.8
56
43.2

Minor BPS
47.3
-0.1
2.6
77.42
44.7

Associated Gene:

Gene:
ADCY3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

115661276 - 115673152
11877

115659796 - 115673152
13357