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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115678036_115678721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115678036 - 115678721

Intron Length:

686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAC

U12 Branch Point Sequence:

ACAAACAAAAAA

Flanking Amino Acid:

DMAGHPFFYEVRNEFYKDTQ

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

59.6

0.24

65.2

28.2

Major PPT

77.7

0.62

0.9

70.4

36.3

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

37.9

-0.9

1.9

43.03

37.5

Associated Gene:

Gene:

DNAJC27

Ensembl Gene ID:

ENSAPLG00000012805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013347

115675057 - 115680822

5766