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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115679339_115680597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115679339 - 115680597

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGGCAT

U12 Branch Point Sequence:

TCTTCCTTCCTC

Flanking Amino Acid:

ISMGNAEVGKSCIIKRYCEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

46.9

-0.1

1.6

57.1

49.4

Major PPT

80.4

0.68

0.7

72.6

32.2

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

44.4

-0.4

3.6

69.44

42.9

Associated Gene:

Gene:

DNAJC27

Ensembl Gene ID:

ENSAPLG00000012805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013347

115675057 - 115680822

5766