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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115691640_115692036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115691640 - 115692036

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

CGCTCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCTGCCCTGACG

Flanking Amino Acid:

VDNIFPEDPEDGLVKTNMEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

75.6

0.58

0.8

31.9

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

49.4

-0.1

1.9

56.11

45.2

Associated Gene:

Gene:

EFR3B

Ensembl Gene ID:

ENSAPLG00000012384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047627

115689583 - 115711889

22307

ENSAPLT00000043324

115689564 - 115711010

21447

ENSAPLT00000012931

115690234 - 115712005

21772