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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115703433_115704518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115703433 - 115704518

Intron Length:

1086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAGC

5'SS Class:

major

3'SS Sequence:

GTTTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TGATGTTCACGT

Flanking Amino Acid:

CFRIIMYSIQPQHSHLVIQQ

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.9

42.4

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

83.1

0.74

0.8

73.9

36.8

Minor 5ss

25.8

-2.8

3.2

33.4

42.1

Minor BPS

39.9

-0.6

2.2

57.23

45.5

Associated Gene:

Gene:

EFR3B

Ensembl Gene ID:

ENSAPLG00000012384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012931

115690234 - 115712005

21772

ENSAPLT00000047627

115689583 - 115711889

22307

ENSAPLT00000043324

115689564 - 115711010

21447

ENSAPLT00000025492

115692058 - 115711112

19055