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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115707824_115708504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115707824 - 115708504

Intron Length:

681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGTGCC

5'SS Class:

major

3'SS Sequence:

CCCTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TCCTCTCTGAGT

Flanking Amino Acid:

HGNRQKFATISTISDISVLK

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.3

68.5

37.7

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

0.72

0.7

76.1

Minor 5ss

28.3

-2.5

3.1

36.6

40.4

Minor BPS

48.3

-0

67.08

44.4

Associated Gene:

Gene:

EFR3B

Ensembl Gene ID:

ENSAPLG00000012384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012931

115690234 - 115712005

21772