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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115710570_115711778_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

115710570 - 115711778

Intron Length:

1209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGCAGGAG

5'SS Class:

weak_major

3'SS Sequence:

CAGGGTAGTCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TTCTTAGCCATG

Flanking Amino Acid:

PQLTGTCCPGPEKALEKYRL

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.5

0.13

1.1

44.4

39.3

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

54.4

0.1

1.1

43.3

46.2

Minor 5ss

-3.3

3.4

18.7

38.3

Minor BPS

34.3

-1.3

2.4

43.48

42.9

Associated Gene:

Gene:

EFR3B

Ensembl Gene ID:

ENSAPLG00000012384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047627

115689583 - 115711889

22307