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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115739000_115739219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115739000 - 115739219

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGACAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGGTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

GGGGCTTTATTT

Flanking Amino Acid:

RAFVRGFDKPREKSRAEKEA

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

67.8

39.3

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

69.9

0.45

0.9

66.2

40.8

Minor 5ss

29.9

-2.3

3.3

38.1

46.8

Minor BPS

48.8

-0

1.7

60.73

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040445

115700953 - 115740920

39968

ENSAPLT00000037437

115688227 - 115742304

54078