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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115740421_115740536_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115740421 - 115740536

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CTGTTTCTATGC

Flanking Amino Acid:

RILELLSDESGFLIERKLLR

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

73.8

0.59

1.3

72.8

Major PPT

63.3

0.3

1.1

60.6

40.6

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

41.2

-0.6

49.38

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040445

115700953 - 115740920

39968

ENSAPLT00000037437

115688227 - 115742304

54078