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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115741456_115742164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

115741456 - 115742164

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACAAAA

5'SS Class:

major

3'SS Sequence:

TGTCCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGGAA

U12 Branch Point Sequence:

TTTTTGGGAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

33.3

Major BPS

48.8

-0

1.5

49.1

46.3

Major PPT

80.8

0.69

0.8

77.5

31.2

Minor 5ss

32.9

-2

2.9

39.7

45.8

Minor BPS

44.3

-0.4

2.6

66.18

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022349

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037437

115688227 - 115742304

54078