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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11574272_11575509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11574272 - 11575509

Intron Length:

1238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TATTCTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTCTTTGACA

Flanking Amino Acid:

TIDDGYFGIHNGIETVDAGW

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

67.8

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.5

0.66

76.3

37.4

Minor 5ss

33.9

-1.8

3.2

41.8

40.2

Minor BPS

80.4

0.95

83.24

30.5

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847