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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11575634_11576718_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11575634 - 11576718

Intron Length:

1085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGATCGGGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGTAAGTTAACC

Flanking Amino Acid:

TKKKFKTSRFRVKLTLEGLE

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

57.7

0.17

1.1

54.4

41.1

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

51.1

0.01

2.3

69.25

41.6

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847