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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11576966_11578037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11576966 - 11578037

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

ATAACAGTAGGT

Flanking Amino Acid:

NLELIFDFFEEDLSEKVLQD

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.9

36.3

Major BPS

69.1

0.48

32.1

Major PPT

79.1

0.65

0.9

76.9

37.3

Minor 5ss

46.6

-0.3

2.5

61.6

43.3

Minor BPS

37.8

-0.8

2.4

57.4

44.7

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847