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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11578201_11578290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11578201 - 11578290

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGTTG

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ATCTTTTGACAT

Flanking Amino Acid:

NPRKTIGKVRVDYIIIKPIQ

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

63.9

42.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

85.6

0.8

0.6

81.4

23.6

Minor 5ss

38.6

-1.3

3.6

55.1

49.1

Minor BPS

46.5

-0.1

1.7

63.54

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000022439

11558710 - 11594197

35488

ENSAPLT00000008749

11552521 - 11593367

40847