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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11587529_11593162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11587529 - 11593162

Intron Length:

5634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCATTTATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GTCTCATTTATT

Flanking Amino Acid:

EYGVHGLIYDRIYDSNPEQP

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

78.5

0.64

0.9

76.8

36.3

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

54.8

0.23

1.9

73.98

42.7

Associated Gene:

Gene:

GPCPD1

Ensembl Gene ID:

ENSAPLG00000008381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045315

11553279 - 11594197

40919

ENSAPLT00000008749

11552521 - 11593367

40847