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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115898151_115900158_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115898151 - 115900158

Intron Length:

2008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGTGAA

5'SS Class:

major

3'SS Sequence:

GCCTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCTTGCTGACCC

Flanking Amino Acid:

LAHIHYGVVVVSQLSRHFNI

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

35.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.45

0.9

60.8

40.3

Minor 5ss

30.7

-2.2

3.4

36.2

43.3

Minor BPS

46.4

-0.3

2.2

58.45

46.5

Associated Gene:

Gene:

SELENOI

Ensembl Gene ID:

ENSAPLG00000009483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044264

115898085 - 115910274

12190

ENSAPLT00000041712

115898085 - 115913561

15477

ENSAPLT00000009909

115897085 - 115908279

11195