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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115901780_115903261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115901780 - 115903261

Intron Length:

1482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

GGGGCAGTAACG

Flanking Amino Acid:

YRDLFTTMIIACALTVTLPM

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

54.4

0.11

1.2

36.4

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

42.1

-0.7

2.3

45.91

46.1

Associated Gene:

Gene:

SELENOI

Ensembl Gene ID:

ENSAPLG00000009483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041712

115898085 - 115913561

15477

ENSAPLT00000009909

115897085 - 115908279

11195

ENSAPLT00000044264

115898085 - 115910274

12190