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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115903371_115904619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115903371 - 115904619

Intron Length:

1249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGCTGCTGACAC

Flanking Amino Acid:

LPWGYDISQVTISIVYIVTA

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

86.6

0.82

0.7

84.6

30.4

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

42.7

-0.5

2.1

53.08

44.1

Associated Gene:

Gene:

SELENOI

Ensembl Gene ID:

ENSAPLG00000009483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044264

115898085 - 115910274

12190

ENSAPLT00000041712

115898085 - 115913561

15477

ENSAPLT00000009909

115897085 - 115908279

11195