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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115904883_115905376_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115904883 - 115905376

Intron Length:

494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

TCTGTCAAAACT

Flanking Amino Acid:

GLLNFIAYTLDGVDGKQARR

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

63.3

0.33

1.2

39.8

Major PPT

77.1

0.61

0.8

68.6

37.2

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

48.9

-0

71.76

45.4

Associated Gene:

Gene:

SELENOI

Ensembl Gene ID:

ENSAPLG00000009483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044264

115898085 - 115910274

12190

ENSAPLT00000041712

115898085 - 115913561

15477

ENSAPLT00000009909

115897085 - 115908279

11195