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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115905452_115907246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115905452 - 115907246

Intron Length:

1795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTGATCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTTTCTGATCT

Flanking Amino Acid:

AYFDPDFYASAPDHQHVPNG

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

66.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.59

0.9

69.6

36.6

Minor 5ss

34.5

-1.8

3.4

44.4

Minor BPS

61.8

0.45

1.7

80.23

41.8

Associated Gene:

Gene:

SELENOI

Ensembl Gene ID:

ENSAPLG00000009483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009909

115897085 - 115908279

11195