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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115937094_115937138_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

115937094 - 115937138

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCATGGAGC

5'SS Class:

major

3'SS Sequence:

CACGGGGCTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCGTAT

U12 Branch Point Sequence:

GACTCCGTATCC

Flanking Amino Acid:

WCYPVPGWNLGTGWGSEGTP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

66.9

41.4

Major BPS

53.9

0.1

1.4

53.6

43.8

Major PPT

43.6

-0.3

1.7

38.1

39.6

Minor 5ss

27.9

-2.5

33.7

42.2

Minor BPS

47.8

-0.1

2.2

60.12

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003493

115936768 - 115939340

2573