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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115943253_115944851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115943253 - 115944851

Intron Length:

1599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GAGACCTCACTG

Flanking Amino Acid:

TVTAANSSFLTDGASAMLIM

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.2

39.9

Major BPS

63.6

0.34

65.3

32.1

Major PPT

74.7

0.56

0.9

68.4

37.3

Minor 5ss

38.6

-1.3

3.4

52.7

46.4

Minor BPS

43.5

-0.6

1.8

42.43

42.5

Associated Gene:

Gene:

HADHB

Ensembl Gene ID:

ENSAPLG00000003436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003536

115939833 - 115953105

13273