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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115948207_115949520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115948207 - 115949520

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTCGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CAGGTTTTAACA

Flanking Amino Acid:

EVKTSNVAREAALGAGFSDK

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.2

38.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

81.4

0.71

0.8

77.5

31.3

Minor 5ss

33.7

-1.9

3.1

43.4

44.3

Minor BPS

56.9

0.21

1.4

59.06

41.5

Associated Gene:

Gene:

HADHB

Ensembl Gene ID:

ENSAPLG00000003436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003536

115939833 - 115953105

13273