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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115949621_115950840_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115949621 - 115950840

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

GTCTTCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

ACGGTACAAATT

Flanking Amino Acid:

MPHDLARAALQGLLNRTNVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

69.5

0.48

73.5

28.6

Major PPT

73.3

0.52

0.8

65.9

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

36.7

-0.9

1.9

46.87

39.8

Associated Gene:

Gene:

HADHB

Ensembl Gene ID:

ENSAPLG00000003436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003536

115939833 - 115953105

13273