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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115952349_115952726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115952349 - 115952726

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

CCTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAC

U12 Branch Point Sequence:

TTTGACAGATTC

Flanking Amino Acid:

PASSAWAARVFARSLSCSPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

77.7

0.69

0.9

69.1

37.9

Major PPT

86.1

0.81

0.8

83.6

31.4

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

41.5

-0.6

57.21

41.4

Associated Gene:

Gene:

HADHB

Ensembl Gene ID:

ENSAPLG00000003436

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003536

115939833 - 115953105

13273