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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115961179_115961265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115961179 - 115961265

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

CAGCTGATAACG

Flanking Amino Acid:

RNISTSTALQARTHVNYDIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

62.7

0.32

1.2

39.8

Major PPT

84.3

0.77

0.8

75.9

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

40.5

-0.8

2.2

42.23

42.6

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019598

115961094 - 115980738

19645

ENSAPLT00000003977

115961094 - 116002788

41695

ENSAPLT00000022260

115961094 - 115980738

19645