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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115964712_115964795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115964712 - 115964795

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GTTTGTTTAAAA

Flanking Amino Acid:

AGGTQRLPKMVGLPAAFDMM

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

73.1

0.58

79.6

29.1

Major PPT

79.2

0.66

0.8

69.6

36.7

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

0.34

1.9

73.23

38.5

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037246

115961094 - 115980738

19645

ENSAPLT00000022260

115961094 - 115980738

19645

ENSAPLT00000019598

115961094 - 115980738

19645

ENSAPLT00000003977

115961094 - 116002788

41695