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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115967491_115967765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115967491 - 115967765

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

TCACGTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGTTTTGTCACG

Flanking Amino Acid:

SAKRSKGLVQKITDYAMALP

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

75.6

0.58

0.9

68.3

37.3

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

45.5

-0.4

2.4

58.79

43.6

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003977

115961094 - 116002788

41695

ENSAPLT00000037246

115961094 - 115980738

19645

ENSAPLT00000022260

115961094 - 115980738

19645

ENSAPLT00000019598

115961094 - 115980738

19645