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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115968794_115972491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115968794 - 115972491

Intron Length:

3698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TAAAGGCCAACC

Flanking Amino Acid:

RDTGYLTESQSFGHLAMTKE

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.5

0.87

0.6

87.2

23.3

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

34.7

-1.1

2.5

46.56

41.7

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022260

115961094 - 115980738

19645

ENSAPLT00000019598

115961094 - 115980738

19645

ENSAPLT00000003977

115961094 - 116002788

41695

ENSAPLT00000037246

115961094 - 115980738

19645