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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115974339_115976364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115974339 - 115976364

Intron Length:

2026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TCTGTCTTAACC

Flanking Amino Acid:

IAAVSKRPEKVIGMHYFSPV

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.7

26.7

Major BPS

77.1

0.67

77.9

32.2

Major PPT

74.6

0.55

0.9

69.2

Minor 5ss

31.6

-2.1

2.6

37.4

Minor BPS

74.2

0.74

1.3

77.35

39.1

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022260

115961094 - 115980738

19645

ENSAPLT00000019598

115961094 - 115980738

19645

ENSAPLT00000003977

115961094 - 116002788

41695

ENSAPLT00000037246

115961094 - 115980738

19645