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Intron Name: Anas_platyrhynchos_platyrhynchos_3_115977379_115977847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

115977379 - 115977847

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GAGATCTCACTG

Flanking Amino Acid:

MLAEVVRVLQEGTDPKKIDA

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

83.1

28.7

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

0.74

0.8

77.3

31.5

Minor 5ss

40.9

-1

2.7

53.5

43.9

Minor BPS

41.1

-0.8

1.7

37.76

38.8

Associated Gene:

Gene:

HADHA

Ensembl Gene ID:

ENSAPLG00000003803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019598

115961094 - 115980738

19645

ENSAPLT00000003977

115961094 - 116002788

41695

ENSAPLT00000037246

115961094 - 115980738

19645

ENSAPLT00000022260

115961094 - 115980738

19645