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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11598318_11599483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11598318 - 11599483

Intron Length:

1166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGC

5'SS Class:

major

3'SS Sequence:

CGTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AACTACTTAACC

Flanking Amino Acid:

HGPLPVSGHKGKMLHEIKSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

57.8

42.2

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

36.1

-1.6

3.4

50.8

45.8

Minor BPS

68.5

0.56

1.5

71.32

39.3

Associated Gene:

Gene:

THUMPD2

Ensembl Gene ID:

ENSAPLG00000008775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009129

11597751 - 11606212

8462