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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11601179_11601666_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11601179 - 11601666

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTGGCA

5'SS Class:

major

3'SS Sequence:

TTCCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTAATGTTATTT

Flanking Amino Acid:

RADLRNPDLEIFVHLNDIHS

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

59.5

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.5

0.82

0.7

84.3

23.5

Minor 5ss

28.2

-2.5

3.6

38.8

46.4

Minor BPS

46.7

-0.1

2.2

68.79

42.5

Associated Gene:

Gene:

THUMPD2

Ensembl Gene ID:

ENSAPLG00000008775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009129

11597751 - 11606212

8462