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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11602718_11603040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11602718 - 11603040

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTCTCTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

ATGTGTTTAACT

Flanking Amino Acid:

ILLEAATEWPEACYWGTDIS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.3

76.5

39.2

Major BPS

66.1

0.4

31.5

Major PPT

75.6

0.58

70.4

Minor 5ss

42.2

-0.9

2.8

59.5

38.1

Minor BPS

67.6

0.63

1.8

81.85

40.1

Associated Gene:

Gene:

THUMPD2

Ensembl Gene ID:

ENSAPLG00000008775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009129

11597751 - 11606212

8462