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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11604355_11605896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11604355 - 11605896

Intron Length:

1542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCGCA

5'SS Class:

major

3'SS Sequence:

CTGCGATTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TAACCTTTATTT

Flanking Amino Acid:

FLPDSLQEMERVLRVGGTVV

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.1

39.9

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

62.1

0.27

1.1

Minor 5ss

35.6

-1.6

3.5

47.9

47.7

Minor BPS

57.8

0.32

1.6

71.51

39.5

Associated Gene:

Gene:

THUMPD2

Ensembl Gene ID:

ENSAPLG00000008775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009129

11597751 - 11606212

8462