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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11605137_11609369_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11605137 - 11609369

Intron Length:

4233

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCAGCTGAA

5'SS Class:

major

3'SS Sequence:

CAGAATAAATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

TTTTGCTTAGGA

Flanking Amino Acid:

AHPFISRSKMIPENKNVKQS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.8

0.28

1.4

60.3

41.5

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

41.1

-0.5

1.7

37.9

42.8

Minor 5ss

28.3

-2.5

4.3

42.9

45.1

Minor BPS

54.2

0.13

2.3

75.03

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009319

11605085 - 11613207

8123