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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116057351_116079292_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
116057351 - 116079292

Intron Length:
21942

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTACGGGGG

5'SS Class:
major

3'SS Sequence:
TTTACTTTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTCAAT

U12 Branch Point Sequence:
GTACTTTCAATT

Flanking Amino Acid:
GRTWAEAARTVLEKYPNTPM

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68
0.43
1.1
50.2
46.5

Major BPS
76.9
0.67
1.2
85
31.9

Major PPT
78.7
0.65
1
73.2
41.9

Minor 5ss
28
-2.5
3.6
37.4
47.3

Minor BPS
52.2
0.15
1.5
66.96
37.9

Associated Gene:

Gene:
ASXL2

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

116056792 - 116153624
96833

116056792 - 116153624
96833