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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116138503_116140681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116138503 - 116140681

Intron Length:

2179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TCATTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTCTTTTTCATT

Flanking Amino Acid:

PFQRSDRLHARQLKRTKCAE

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

100

1.24

0.5

100

Major PPT

85.6

0.8

80.6

31.1

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

54.7

0.23

1.7

71.21

40.9

Associated Gene:

Gene:

ASXL2

Ensembl Gene ID:

ENSAPLG00000005877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024245

116066128 - 116152293

86166

ENSAPLT00000019597

116056792 - 116153624

96833

ENSAPLT00000006097

116119204 - 116152293

33090

ENSAPLT00000006093

116108921 - 116152293

43373

ENSAPLT00000036278

116098476 - 116153624

55149