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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116176368_116179685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

116176368 - 116179685

Intron Length:

3318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCATGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TTCTCTTGCATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

73.6

30.4

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

75.3

0.57

68.3

41.9

Minor 5ss

33.6

-1.9

3.1

42.4

45.1

Minor BPS

48.7

-0.2

59.4

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026591

116176123 - 116196314

20192