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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116180013_116189651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

116180013 - 116189651

Intron Length:

9639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

AATTCTAGCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

60.7

0.27

65.3

28.1

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

45.1

-0.3

2.1

60.98

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026591

116176123 - 116196314

20192