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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1162451_1172936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1162451 - 1172936

Intron Length:

10486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CAATTTTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTCTCCACAACA

Flanking Amino Acid:

LLETMQNKFIGSPFLANEDG

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

27.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

68.7

0.42

61.3

44.1

Minor 5ss

40.4

-1.1

2.8

51.7

39.2

Minor BPS

62.3

0.38

1.9

76.88

39.9

Associated Gene:

Gene:

TASP1

Ensembl Gene ID:

ENSAPLG00000011487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038158

1148624 - 1230576

81953

ENSAPLT00000012059

1148395 - 1230576

82182