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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116261583_116278818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116261583 - 116278818

Intron Length:

17236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCATCACTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTTGCCTTCATC

Flanking Amino Acid:

MSSGAPTPTKRLQCNPDAAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

0.62

1.1

77.2

Major PPT

67.9

0.4

59.9

40.4

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

65.8

0.48

1.8

77.77

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005212

116261505 - 116368067

106563