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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116284872_116300403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116284872 - 116300403

Intron Length:

15532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

CTCCATCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CTGTGTTTAATT

Flanking Amino Acid:

ARLAAEAGNAPRPPTDLGFN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

66.9

0.38

0.9

58.9

36.7

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

61.1

0.43

1.8

74.76

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563