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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116300490_116302156_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116300490 - 116302156

Intron Length:

1667

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

ATCACTGATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCCTCTTTAATC

Flanking Amino Acid:

QLIAELENKNREILQEIQRL

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

60.9

0.25

54.3

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

74.3

0.74

1.2

73.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563