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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116314399_116352572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116314399 - 116352572

Intron Length:

38174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

GTTTCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AATTTGGAAACT

Flanking Amino Acid:

LLKEEEQKQAAQAAGSAHSS

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

69.1

38.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

76.7

0.6

0.9

70.7

35.1

Minor 5ss

41.8

-0.9

2.8

54.8

43.5

Minor BPS

41.9

-0.5

2.7

66.52

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563