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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11634454_11636644_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
11634454 - 11636644

Intron Length:
2191

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGTGTAT

5'SS Class:
major

3'SS Sequence:
ATATTTTATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
TATTATGTAAAT

Flanking Amino Acid:
IAYVSRETLQGLYYLHSKGK

Intron Amino Acid Position:
128

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
68.5
38.9

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
78.9
0.65
1
74.4
39.7

Minor 5ss
37.1
-1.5
3.6
55.1
49.2

Minor BPS
49.4
0.03
2.2
75.42
40.9

Associated Gene:

Gene:
MAP4K3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11612943 - 11690983
78041

11612943 - 11690983
78041

11612943 - 11683618
70676

11612943 - 11690983
78041