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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116352733_116358814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116352733 - 116358814

Intron Length:

6082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAG

U12 Branch Point Sequence:

GCTGCTGTACCT

Flanking Amino Acid:

GGDVQEAFTQGTRRNLRNDL

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

71.4

0.48

0.8

61.9

34.8

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

44.8

-0.3

2.3

63.47

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563