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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116358905_116361861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116358905 - 116361861

Intron Length:

2957

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTGAAG

Flanking Amino Acid:

MSSLVKELHSAEEEDEEEME

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

66.1

41.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

79.4

32.2

Minor 5ss

37.2

-1.5

3.3

43.1

44.2

Minor BPS

57.4

0.09

1.5

62.43

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563