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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116361916_116365272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116361916 - 116365272

Intron Length:

3357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TGCTTGATAAAT

Flanking Amino Acid:

MEKMQNGKDRG*

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

77.4

0.62

0.9

71.4

32.9

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

45.1

-0.2

2.3

66.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004980

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044772

116284602 - 116368067

83466

ENSAPLT00000005212

116261505 - 116368067

106563