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Intron Name: Anas_platyrhynchos_platyrhynchos_3_116392045_116392563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116392045 - 116392563

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGCT

5'SS Class:

major

3'SS Sequence:

CTTCTCCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TTCTCCCTACAG

Flanking Amino Acid:

GTRWCPAPDCSYAVIAYGCA

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

74.9

35.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

83.1

0.75

0.7

76.7

25.5

Minor 5ss

35.4

-1.7

3.2

50.4

Minor BPS

48.5

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022092

116390238 - 116395771

5534